Data Production and Processing Standard of the Hi-C Mapping Center
Data Production and Processing Standard of the Hi-C Mapping Center
Juicebox (Desktop) - Juicebox
Juicebox (Desktop) - Juicebox
Aiden Lab - The Center for Genome Architecture - Baylor College of Medicine
Genome scaffolding with the Juicer, JuiceBox, 3D-DNA pipeline - Bioinformatics Workbook
Data Production and Processing Standard of the Hi-C Mapping Center
Chromatin conformation capture (Hi-C) sequencing of patient-derived xenografts: analysis guidelines. - Abstract - Europe PMC
Chromatin conformation capture (Hi-C) sequencing of patient-derived xenografts: analysis guidelines | bioRxiv
FAN-C: a feature-rich framework for the analysis and visualisation of chromosome conformation capture data | Genome Biology | Full Text
Pre - aidenlab/juicer GitHub Wiki
Overview of Hi-C analysis pipelines. These pipelines start from raw... | Download Scientific Diagram
HiC-DC+ enables systematic 3D interaction calls and differential analysis for Hi-C and HiChIP | Nature Communications
Arima-HiC+/Arima-High Coverage HiC Kit
Robin H. van der Weide on X: "Main benefits of GENOVA include: 🗂️ imports Juicer, Cooler and HiC-Pro files 🧰 contains the majority of analyses used in literature 🆕 new tools (!)
Genome Browser hic Track Format
Juicebox Provides a Visualization System for Hi-C Contact Maps with Unlimited Zoom - ScienceDirect
Integration of Hi-C with short and long-read genome sequencing reveals the structure of germline rearranged genomes | Nature Communications
Explaining myJuicer.sh different steps
Quality metrics for selecting the optimal PDX Hi-C data processing... | Download Scientific Diagram
Minute-Made Data Analysis: Tools for Rapid Interrogation of Hi-C Contacts - ScienceDirect
Juicer Provides a One-Click System for Analyzing Loop-Resolution Hi-C Experiments: Cell Systems
Joint profiling of DNA methylation and chromatin architecture in single cells | Nature Methods
Hi-C (genomic analysis technique) - Wikipedia
Overview of PHi-C pipeline. Hi-C contact matrix data generated from a... | Download Scientific Diagram
